Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC124356.1-201ENSMUST00000221469 698 ntBASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rif1Q6PR54 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 AC107752.1-201ENSMUST00000219362 469 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm38348-201ENSMUST00000191718 2273 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm12774-201ENSMUST00000117881 416 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Mir3100-201ENSMUST00000174918 65 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.93□□□□□ -0.82
Rif1Q6PR54 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rif1Q6PR54 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm42970-201ENSMUST00000196407 1352 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm43244-201ENSMUST00000196994 1285 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm42689-201ENSMUST00000202403 404 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 AC154461.1-201ENSMUST00000224207 1005 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Sorbs3-204ENSMUST00000227929 2460 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm11473-201ENSMUST00000118980 359 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Gm14497-201ENSMUST00000119537 580 ntBASIC9.92□□□□□ -0.82
Rif1Q6PR54 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms