Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim38Q5SZ99 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Gm45433-201ENSMUST00000209386 247 ntBASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim38Q5SZ99 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm26047-201ENSMUST00000157308 113 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm26047-202ENSMUST00000198840 115 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm9797-202ENSMUST00000218003 294 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm18065-201ENSMUST00000221395 526 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm270-201ENSMUST00000223010 976 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Gm26448-201ENSMUST00000082446 203 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim38Q5SZ99 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.15□□□□□ -0.46
Trim38Q5SZ99 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms