Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC18.84■□□□□ 0.61
Cux2P70298 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC18.84■□□□□ 0.61
Cux2P70298 Gm37688-201ENSMUST00000195195 465 ntBASIC18.84■□□□□ 0.61
Cux2P70298 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC18.84■□□□□ 0.61
Cux2P70298 CT030195.2-201ENSMUST00000226074 1286 ntBASIC18.84■□□□□ 0.61
Cux2P70298 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cux2P70298 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cux2P70298 Gm11380-201ENSMUST00000118067 560 ntBASIC18.83■□□□□ 0.61
Cux2P70298 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cux2P70298 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cux2P70298 Gm5210-201ENSMUST00000182150 1010 ntBASIC18.83■□□□□ 0.61
Cux2P70298 Gm44498-201ENSMUST00000199509 111 ntBASIC18.83■□□□□ 0.61
Cux2P70298 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC18.83■□□□□ 0.61
Cux2P70298 AC164429.1-201ENSMUST00000224210 518 ntBASIC18.83■□□□□ 0.61
Cux2P70298 CT025618.1-203ENSMUST00000227008 589 ntBASIC18.83■□□□□ 0.61
Cux2P70298 AC107711.4-201ENSMUST00000228948 440 ntBASIC18.83■□□□□ 0.61
Cux2P70298 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cux2P70298 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC18.83■□□□□ 0.61
Cux2P70298 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cux2P70298 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cux2P70298 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cux2P70298 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC18.83■□□□□ 0.6
Cux2P70298 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Cux2P70298 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC18.83■□□□□ 0.6
Cux2P70298 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC18.83■□□□□ 0.6
Cux2P70298 Gm8643-201ENSMUST00000195228 625 ntBASIC18.83■□□□□ 0.6
Cux2P70298 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 AC241616.1-201ENSMUST00000213741 166 ntBASIC18.83■□□□□ 0.6
Cux2P70298 Gm5278-201ENSMUST00000055957 552 ntBASIC18.83■□□□□ 0.6
Cux2P70298 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cux2P70298 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cux2P70298 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Gm5159-201ENSMUST00000212733 1652 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Cux2P70298 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cux2P70298 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Gm11540-201ENSMUST00000117457 780 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Gm15636-201ENSMUST00000119205 668 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Gm6291-201ENSMUST00000179994 309 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Mir8091-201ENSMUST00000183602 139 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC18.82■□□□□ 0.6
Cux2P70298 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC18.82■□□□□ 0.6
Cux2P70298 Gm45090-201ENSMUST00000208775 1148 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Gm7183-201ENSMUST00000213870 1005 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Gm5040-201ENSMUST00000218609 800 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Gm29689-201ENSMUST00000221076 589 ntBASIC18.82■□□□□ 0.6
Cux2P70298 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 AC154461.1-201ENSMUST00000224207 1005 ntBASIC18.82■□□□□ 0.6
Cux2P70298 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cux2P70298 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Cux2P70298 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC18.81■□□□□ 0.6
Cux2P70298 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cux2P70298 Gm11473-201ENSMUST00000118980 359 ntBASIC18.81■□□□□ 0.6
Cux2P70298 Gm4917-201ENSMUST00000121452 650 ntBASIC18.81■□□□□ 0.6
Cux2P70298 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC18.81■□□□□ 0.6
Cux2P70298 Gm5526-201ENSMUST00000153604 423 ntBASIC18.81■□□□□ 0.6
Cux2P70298 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cux2P70298 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC18.81■□□□□ 0.6
Cux2P70298 Gm18555-201ENSMUST00000197935 584 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms