Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.61□□□□□ -0.87
VhlP40338 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Gm11425-201ENSMUST00000119608 498 ntBASIC9.61□□□□□ -0.87
VhlP40338 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.61□□□□□ -0.87
VhlP40338 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.61□□□□□ -0.87
VhlP40338 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.61□□□□□ -0.87
VhlP40338 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.61□□□□□ -0.87
VhlP40338 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 AY702102-202ENSMUST00000194651 1173 ntBASIC9.61□□□□□ -0.87
VhlP40338 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.61□□□□□ -0.87
VhlP40338 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Gm9899-201ENSMUST00000065519 555 ntBASIC9.61□□□□□ -0.87
VhlP40338 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Gm9396-201ENSMUST00000076703 567 ntBASIC9.61□□□□□ -0.87
VhlP40338 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.61□□□□□ -0.87
VhlP40338 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
VhlP40338 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.61□□□□□ -0.87
VhlP40338 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.61□□□□□ -0.87
VhlP40338 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VhlP40338 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.61□□□□□ -0.87
VhlP40338 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
VhlP40338 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.6□□□□□ -0.87
VhlP40338 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
VhlP40338 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.6□□□□□ -0.87
VhlP40338 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.6□□□□□ -0.87
VhlP40338 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
VhlP40338 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.6□□□□□ -0.87
VhlP40338 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
VhlP40338 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
VhlP40338 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.6□□□□□ -0.87
VhlP40338 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.6□□□□□ -0.87
VhlP40338 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Gm24845-201ENSMUST00000158034 109 ntBASIC9.6□□□□□ -0.87
VhlP40338 Gm2546-201ENSMUST00000182630 991 ntBASIC9.6□□□□□ -0.87
VhlP40338 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.6□□□□□ -0.87
VhlP40338 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.6□□□□□ -0.87
VhlP40338 Gm19287-201ENSMUST00000203190 358 ntBASIC9.6□□□□□ -0.87
VhlP40338 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9.6□□□□□ -0.87
VhlP40338 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
VhlP40338 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VhlP40338 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms