Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.04□□□□□ -0.64
Clk1P22518 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Clk1P22518 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Clk1P22518 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.03□□□□□ -0.64
Clk1P22518 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.03□□□□□ -0.64
Clk1P22518 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Clk1P22518 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Clk1P22518 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Gm14247-201ENSMUST00000120950 237 ntBASIC11.03□□□□□ -0.64
Clk1P22518 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Gm6963-201ENSMUST00000147879 379 ntBASIC11.03□□□□□ -0.64
Clk1P22518 Gm25668-201ENSMUST00000157700 129 ntBASIC11.03□□□□□ -0.64
Clk1P22518 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Gm27320-201ENSMUST00000184892 109 ntBASIC11.03□□□□□ -0.64
Clk1P22518 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.03□□□□□ -0.64
Clk1P22518 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.03□□□□□ -0.64
Clk1P22518 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.03□□□□□ -0.64
Clk1P22518 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.03□□□□□ -0.64
Clk1P22518 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.03□□□□□ -0.64
Clk1P22518 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clk1P22518 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.03□□□□□ -0.64
Clk1P22518 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.03□□□□□ -0.64
Clk1P22518 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Clk1P22518 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clk1P22518 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clk1P22518 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Clk1P22518 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clk1P22518 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clk1P22518 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.02□□□□□ -0.64
Clk1P22518 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Clk1P22518 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clk1P22518 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Gm15276-201ENSMUST00000145953 498 ntBASIC11.02□□□□□ -0.65
Clk1P22518 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.02□□□□□ -0.65
Clk1P22518 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.02□□□□□ -0.65
Clk1P22518 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.02□□□□□ -0.65
Clk1P22518 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.02□□□□□ -0.65
Clk1P22518 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms