Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Gm5620-201ENSMUST00000077991 1348 ntBASIC8.46□□□□□ -1.06
TtrP07309 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC8.46□□□□□ -1.06
TtrP07309 Gm7964-201ENSMUST00000051522 1378 ntBASIC8.46□□□□□ -1.06
TtrP07309 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
TtrP07309 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
TtrP07309 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
TtrP07309 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TtrP07309 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.45□□□□□ -1.06
TtrP07309 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Gm8146-201ENSMUST00000192106 1847 ntBASIC8.45□□□□□ -1.06
TtrP07309 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Gm21136-201ENSMUST00000186812 2575 ntBASIC8.45□□□□□ -1.06
TtrP07309 Gm6605-201ENSMUST00000031488 2574 ntBASIC8.45□□□□□ -1.06
TtrP07309 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Gm12058-201ENSMUST00000118614 437 ntBASIC8.45□□□□□ -1.06
TtrP07309 Gm14247-201ENSMUST00000120950 237 ntBASIC8.45□□□□□ -1.06
TtrP07309 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC8.45□□□□□ -1.06
TtrP07309 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Rprl1-201ENSMUST00000158050 327 ntBASIC8.45□□□□□ -1.06
TtrP07309 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC8.45□□□□□ -1.06
TtrP07309 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
TtrP07309 Gm42937-201ENSMUST00000197360 752 ntBASIC8.45□□□□□ -1.06
TtrP07309 Gm43818-201ENSMUST00000200605 466 ntBASIC8.45□□□□□ -1.06
TtrP07309 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC8.45□□□□□ -1.06
TtrP07309 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Gm6091-201ENSMUST00000098307 165 ntBASIC8.45□□□□□ -1.06
TtrP07309 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Gm43579-201ENSMUST00000202387 1307 ntBASIC8.45□□□□□ -1.06
TtrP07309 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
TtrP07309 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
TtrP07309 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC8.45□□□□□ -1.06
TtrP07309 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TtrP07309 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC8.44□□□□□ -1.06
TtrP07309 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms