Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxa4P06798 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxa4P06798 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Hoxa4P06798 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxa4P06798 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxa4P06798 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm14071-201ENSMUST00000117817 509 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm37986-201ENSMUST00000193285 383 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm18753-201ENSMUST00000201000 566 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm43852-201ENSMUST00000202098 917 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm43966-201ENSMUST00000203301 612 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Lect2-202ENSMUST00000225183 823 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hoxa4P06798 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxa4P06798 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxa4P06798 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Hoxa4P06798 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hoxa4P06798 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.53□□□□□ -0.56
Hoxa4P06798 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxa4P06798 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hoxa4P06798 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxa4P06798 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.52□□□□□ -0.56
Hoxa4P06798 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Gm13611-201ENSMUST00000118269 318 ntBASIC11.52□□□□□ -0.57
Hoxa4P06798 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Gm15432-201ENSMUST00000121106 195 ntBASIC11.52□□□□□ -0.57
Hoxa4P06798 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Gm20495-201ENSMUST00000173902 235 ntBASIC11.52□□□□□ -0.57
Hoxa4P06798 Gm23045-201ENSMUST00000175041 96 ntBASIC11.52□□□□□ -0.57
Hoxa4P06798 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Gm2517-201ENSMUST00000215651 348 ntBASIC11.52□□□□□ -0.57
Hoxa4P06798 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxa4P06798 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.52□□□□□ -0.57
Hoxa4P06798 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxa4P06798 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms