Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tcof1O08784 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tcof1O08784 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Tcof1O08784 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Tcof1O08784 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.71□□□□□ -0.22
Tcof1O08784 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tcof1O08784 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.7□□□□□ -0.22
Tcof1O08784 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.7□□□□□ -0.22
Tcof1O08784 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Tcof1O08784 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Tcof1O08784 Gm24844-201ENSMUST00000158679 127 ntBASIC13.7□□□□□ -0.22
Tcof1O08784 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Tcof1O08784 Mir8093-201ENSMUST00000185043 137 ntBASIC13.7□□□□□ -0.22
Tcof1O08784 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Gm29499-201ENSMUST00000189151 486 ntBASIC13.7□□□□□ -0.22
Tcof1O08784 Gm28329-201ENSMUST00000191208 689 ntBASIC13.7□□□□□ -0.22
Tcof1O08784 Gm29171-201ENSMUST00000191397 486 ntBASIC13.7□□□□□ -0.22
Tcof1O08784 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.7□□□□□ -0.22
Tcof1O08784 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.7□□□□□ -0.22
Tcof1O08784 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tcof1O08784 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tcof1O08784 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.7□□□□□ -0.22
Tcof1O08784 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Tcof1O08784 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.7□□□□□ -0.22
Tcof1O08784 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.7□□□□□ -0.22
Tcof1O08784 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tcof1O08784 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcof1O08784 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tcof1O08784 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tcof1O08784 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tcof1O08784 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.69□□□□□ -0.22
Tcof1O08784 Gm11956-201ENSMUST00000119525 512 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Gm12029-201ENSMUST00000120073 832 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tcof1O08784 Gm7666-201ENSMUST00000146631 819 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.69□□□□□ -0.22
Tcof1O08784 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.69□□□□□ -0.22
Tcof1O08784 Gm3150-201ENSMUST00000166418 204 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.69□□□□□ -0.22
Tcof1O08784 Mir8115-201ENSMUST00000184992 119 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Gm38314-201ENSMUST00000195709 625 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Gm45219-201ENSMUST00000205602 465 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.69□□□□□ -0.22
Tcof1O08784 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.69□□□□□ -0.22
Tcof1O08784 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tcof1O08784 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tcof1O08784 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tcof1O08784 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.69□□□□□ -0.22
Tcof1O08784 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms