Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ccl28Q9JIL2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Gzmn-202ENSMUST00000225535 989 ntBASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.45□□□□□ -0.9
Ccl28Q9JIL2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gm6114-201ENSMUST00000182472 968 ntBASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl28Q9JIL2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms