Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rtp4Q9ER80 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Rprl1-201ENSMUST00000158050 327 ntBASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gm18038-201ENSMUST00000197900 485 ntBASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.04□□□□□ -0.64
Rtp4Q9ER80 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rtp4Q9ER80 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Gm14058-201ENSMUST00000116082 735 ntBASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Gm12036-201ENSMUST00000120008 530 ntBASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.03□□□□□ -0.64
Rtp4Q9ER80 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rtp4Q9ER80 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms