Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga6Q91XY2 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.77□□□□□ -0.52
Pcdhga6Q91XY2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm11663-201ENSMUST00000117888 290 ntBASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm13263-201ENSMUST00000121271 838 ntBASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm11980-201ENSMUST00000121445 986 ntBASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm19009-201ENSMUST00000223072 823 ntBASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga6Q91XY2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm13916-201ENSMUST00000117368 628 ntBASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm4862-201ENSMUST00000170405 438 ntBASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga6Q91XY2 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga6Q91XY2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms