Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.09□□□□□ -0.79
Tram1Q91V04 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.08□□□□□ -0.8
Tram1Q91V04 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm11814-201ENSMUST00000119515 929 ntBASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm14999-201ENSMUST00000121039 624 ntBASIC10.08□□□□□ -0.8
Tram1Q91V04 Mir1894-201ENSMUST00000122802 81 ntBASIC10.08□□□□□ -0.8
Tram1Q91V04 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm22331-201ENSMUST00000158066 136 ntBASIC10.08□□□□□ -0.8
Tram1Q91V04 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.08□□□□□ -0.8
Tram1Q91V04 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.08□□□□□ -0.8
Tram1Q91V04 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm10254-201ENSMUST00000052888 867 ntBASIC10.08□□□□□ -0.8
Tram1Q91V04 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.08□□□□□ -0.8
Tram1Q91V04 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.08□□□□□ -0.8
Tram1Q91V04 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Tram1Q91V04 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tram1Q91V04 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.07□□□□□ -0.8
Tram1Q91V04 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.07□□□□□ -0.8
Tram1Q91V04 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.07□□□□□ -0.8
Tram1Q91V04 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Tram1Q91V04 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.07□□□□□ -0.8
Tram1Q91V04 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Tram1Q91V04 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.07□□□□□ -0.8
Tram1Q91V04 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.07□□□□□ -0.8
Tram1Q91V04 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tram1Q91V04 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms