Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm18038-201ENSMUST00000197900 485 ntBASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm5369-201ENSMUST00000217499 588 ntBASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm9996-201ENSMUST00000070359 913 ntBASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Gm14058-201ENSMUST00000116082 735 ntBASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Gm13035-201ENSMUST00000117496 342 ntBASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Gm15515-201ENSMUST00000117827 822 ntBASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Gm19994-201ENSMUST00000217086 586 ntBASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps53Q8CCB4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Gm44551-201ENSMUST00000208804 171 ntBASIC13.67□□□□□ -0.22
Vps53Q8CCB4 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.67□□□□□ -0.22
Vps53Q8CCB4 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Gm10179-201ENSMUST00000086233 688 ntBASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vps53Q8CCB4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms