Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Gm18164-201ENSMUST00000213769 927 ntBASIC10.97□□□□□ -0.65
Pif1Q80SX8 Gm18166-201ENSMUST00000215557 927 ntBASIC10.97□□□□□ -0.65
Pif1Q80SX8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.97□□□□□ -0.65
Pif1Q80SX8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.97□□□□□ -0.65
Pif1Q80SX8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.96□□□□□ -0.65
Pif1Q80SX8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm5419-201ENSMUST00000119301 527 ntBASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm15595-201ENSMUST00000120840 961 ntBASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm27910-201ENSMUST00000185004 107 ntBASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm4870-201ENSMUST00000198525 1251 ntBASIC10.96□□□□□ -0.65
Pif1Q80SX8 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.96□□□□□ -0.65
Pif1Q80SX8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pif1Q80SX8 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pif1Q80SX8 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pif1Q80SX8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms