Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Gm12663-201ENSMUST00000118481 958 ntBASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Gm21778-201ENSMUST00000178779 471 ntBASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Mir7051-201ENSMUST00000184167 73 ntBASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx55Q6ZPL9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm11960-201ENSMUST00000122068 925 ntBASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Mir1905-201ENSMUST00000122779 82 ntBASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm25830-201ENSMUST00000158923 132 ntBASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm42433-201ENSMUST00000196806 940 ntBASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm6855-201ENSMUST00000206307 790 ntBASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx55Q6ZPL9 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.3□□□□□ -0.28
Ddx55Q6ZPL9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms