Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Npas1P97459 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Npas1P97459 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Gm12138-201ENSMUST00000122180 951 ntBASIC9.85□□□□□ -0.83
Npas1P97459 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.85□□□□□ -0.83
Npas1P97459 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Npas1P97459 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.85□□□□□ -0.83
Npas1P97459 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.85□□□□□ -0.83
Npas1P97459 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Npas1P97459 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Npas1P97459 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Npas1P97459 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.85□□□□□ -0.83
Npas1P97459 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Spata33-207ENSMUST00000212760 4074 ntBASIC9.85□□□□□ -0.83
Npas1P97459 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Npas1P97459 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Npas1P97459 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.85□□□□□ -0.83
Npas1P97459 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Npas1P97459 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Npas1P97459 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Npas1P97459 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Npas1P97459 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Npas1P97459 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.84□□□□□ -0.83
Npas1P97459 Gm8018-201ENSMUST00000173536 789 ntBASIC9.84□□□□□ -0.83
Npas1P97459 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.84□□□□□ -0.83
Npas1P97459 Gm6745-201ENSMUST00000199216 526 ntBASIC9.84□□□□□ -0.83
Npas1P97459 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Gm6007-201ENSMUST00000208170 823 ntBASIC9.84□□□□□ -0.83
Npas1P97459 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.84□□□□□ -0.83
Npas1P97459 AC158982.1-201ENSMUST00000228377 901 ntBASIC9.84□□□□□ -0.83
Npas1P97459 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Npas1P97459 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Npas1P97459 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Npas1P97459 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.84□□□□□ -0.83
Npas1P97459 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.84□□□□□ -0.83
Npas1P97459 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Npas1P97459 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Npas1P97459 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.83□□□□□ -0.84
Npas1P97459 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.83□□□□□ -0.84
Npas1P97459 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.83□□□□□ -0.84
Npas1P97459 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Npas1P97459 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Npas1P97459 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.83□□□□□ -0.84
Npas1P97459 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.83□□□□□ -0.84
Npas1P97459 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Npas1P97459 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Npas1P97459 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms