Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.06□□□□□ -0.32
Tpm1P58771 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Tpm1P58771 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Gm12490-201ENSMUST00000120255 560 ntBASIC13.06□□□□□ -0.32
Tpm1P58771 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.06□□□□□ -0.32
Tpm1P58771 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.06□□□□□ -0.32
Tpm1P58771 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Gm6222-202ENSMUST00000182143 629 ntBASIC13.06□□□□□ -0.32
Tpm1P58771 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tpm1P58771 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.06□□□□□ -0.32
Tpm1P58771 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tpm1P58771 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tpm1P58771 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.05□□□□□ -0.32
Tpm1P58771 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.05□□□□□ -0.32
Tpm1P58771 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.05□□□□□ -0.32
Tpm1P58771 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Tpm1P58771 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.05□□□□□ -0.32
Tpm1P58771 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.05□□□□□ -0.32
Tpm1P58771 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.05□□□□□ -0.32
Tpm1P58771 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.05□□□□□ -0.32
Tpm1P58771 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC13.05□□□□□ -0.32
Tpm1P58771 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tpm1P58771 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Tpm1P58771 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.04□□□□□ -0.32
Tpm1P58771 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Gm10434-201ENSMUST00000101158 471 ntBASIC13.04□□□□□ -0.32
Tpm1P58771 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Gm11700-201ENSMUST00000119409 403 ntBASIC13.04□□□□□ -0.32
Tpm1P58771 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.04□□□□□ -0.32
Tpm1P58771 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.04□□□□□ -0.32
Tpm1P58771 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms