Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.72□□□□□ -0.53
Nckap1P28660 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.72□□□□□ -0.53
Nckap1P28660 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nckap1P28660 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.72□□□□□ -0.53
Nckap1P28660 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nckap1P28660 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nckap1P28660 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.71□□□□□ -0.53
Nckap1P28660 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nckap1P28660 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nckap1P28660 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nckap1P28660 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nckap1P28660 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Nckap1P28660 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nckap1P28660 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.71□□□□□ -0.53
Nckap1P28660 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.71□□□□□ -0.53
Nckap1P28660 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.71□□□□□ -0.53
Nckap1P28660 Gm12407-201ENSMUST00000180219 324 ntBASIC11.71□□□□□ -0.53
Nckap1P28660 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.71□□□□□ -0.53
Nckap1P28660 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.71□□□□□ -0.53
Nckap1P28660 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nckap1P28660 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.71□□□□□ -0.53
Nckap1P28660 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.71□□□□□ -0.53
Nckap1P28660 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.71□□□□□ -0.53
Nckap1P28660 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Snora73b-201ENSMUST00000083419 205 ntBASIC11.71□□□□□ -0.53
Nckap1P28660 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.71□□□□□ -0.53
Nckap1P28660 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nckap1P28660 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Nckap1P28660 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Nckap1P28660 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nckap1P28660 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.71□□□□□ -0.54
Nckap1P28660 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nckap1P28660 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Nckap1P28660 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nckap1P28660 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nckap1P28660 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nckap1P28660 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.7□□□□□ -0.54
Nckap1P28660 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms