Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm25890-201ENSMUST00000177643 165 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Gm22614-201ENSMUST00000178300 165 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ccl6P27784 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm22042-201ENSMUST00000082989 165 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Gm26110-201ENSMUST00000083971 165 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ccl6P27784 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ccl6P27784 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccl6P27784 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.14□□□□□ -0.95
Ccl6P27784 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccl6P27784 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl6P27784 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl6P27784 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.13□□□□□ -0.95
Ccl6P27784 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 Gm35960-201ENSMUST00000202712 767 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 Gm43962-201ENSMUST00000203898 190 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 Gm17812-201ENSMUST00000204935 318 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl6P27784 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl6P27784 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Ccl6P27784 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.13□□□□□ -0.95
Ccl6P27784 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Ccl6P27784 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ccl6P27784 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl6P27784 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccl6P27784 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccl6P27784 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.12□□□□□ -0.95
Ccl6P27784 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Ccl6P27784 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ccl6P27784 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ccl6P27784 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.12□□□□□ -0.95
Ccl6P27784 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ccl6P27784 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccl6P27784 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms