Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Gm11956-201ENSMUST00000119525 512 ntBASIC9.4□□□□□ -0.9
P01727 Gm12036-201ENSMUST00000120008 530 ntBASIC9.4□□□□□ -0.9
P01727 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.4□□□□□ -0.9
P01727 Gm22138-201ENSMUST00000158748 128 ntBASIC9.4□□□□□ -0.9
P01727 Gm8194-201ENSMUST00000159783 859 ntBASIC9.4□□□□□ -0.9
P01727 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.4□□□□□ -0.9
P01727 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.4□□□□□ -0.9
P01727 Mir7076-201ENSMUST00000183519 74 ntBASIC9.4□□□□□ -0.9
P01727 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.4□□□□□ -0.9
P01727 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.4□□□□□ -0.9
P01727 Gm8365-201ENSMUST00000197334 648 ntBASIC9.4□□□□□ -0.9
P01727 Gm43058-201ENSMUST00000197645 625 ntBASIC9.4□□□□□ -0.9
P01727 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Gm8285-201ENSMUST00000208293 759 ntBASIC9.4□□□□□ -0.9
P01727 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.4□□□□□ -0.9
P01727 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
P01727 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01727 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
P01727 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.4□□□□□ -0.91
P01727 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01727 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P01727 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P01727 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
P01727 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.39□□□□□ -0.91
P01727 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.39□□□□□ -0.91
P01727 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.39□□□□□ -0.91
P01727 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P01727 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.39□□□□□ -0.91
P01727 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
P01727 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.39□□□□□ -0.91
P01727 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
P01727 Gm8731-201ENSMUST00000118088 412 ntBASIC9.39□□□□□ -0.91
P01727 Gm11451-201ENSMUST00000118946 630 ntBASIC9.39□□□□□ -0.91
P01727 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.39□□□□□ -0.91
P01727 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.39□□□□□ -0.91
P01727 Gm12407-201ENSMUST00000180219 324 ntBASIC9.39□□□□□ -0.91
P01727 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.39□□□□□ -0.91
P01727 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.39□□□□□ -0.91
P01727 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.39□□□□□ -0.91
P01727 Gm9645-201ENSMUST00000197131 792 ntBASIC9.39□□□□□ -0.91
P01727 Gm6450-201ENSMUST00000200896 574 ntBASIC9.39□□□□□ -0.91
P01727 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.39□□□□□ -0.91
P01727 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.39□□□□□ -0.91
P01727 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
P01727 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
P01727 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.39□□□□□ -0.91
P01727 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P01727 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01727 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms