Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm12377-201ENSMUST00000118656 252 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm19927-201ENSMUST00000185792 781 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm6276-201ENSMUST00000120159 579 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm25319-201ENSMUST00000122552 325 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Ighv1-33-201ENSMUST00000193220 350 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm34248-201ENSMUST00000200027 474 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm44716-201ENSMUST00000209007 710 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a3E9PWQ3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Col6a3E9PWQ3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm16439-201ENSMUST00000100687 564 ntBASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm25148-201ENSMUST00000104611 123 ntBASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 AC174647.1-201ENSMUST00000227419 1271 ntBASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm13688-201ENSMUST00000121557 608 ntBASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm11231-201ENSMUST00000117895 1706 ntBASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Ermard-209ENSMUST00000226561 1019 ntBASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a3E9PWQ3 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 AC154197.1-201ENSMUST00000225136 1382 ntBASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Gm37678-201ENSMUST00000192908 1146 ntBASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Gm10120-201ENSMUST00000219845 357 ntBASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a3E9PWQ3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms