Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 AC134607.1-201ENSMUST00000214707 485 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm13898-201ENSMUST00000141865 610 ntBASIC9.43□□□□□ -0.9
Chd6A3KFM7 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm21631-201ENSMUST00000195041 754 ntBASIC9.43□□□□□ -0.9
Chd6A3KFM7 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm15636-201ENSMUST00000119205 668 ntBASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm2553-201ENSMUST00000215986 605 ntBASIC9.43□□□□□ -0.9
Chd6A3KFM7 AC118639.1-202ENSMUST00000226957 653 ntBASIC9.43□□□□□ -0.9
Chd6A3KFM7 CT010505.2-201ENSMUST00000227918 998 ntBASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.43□□□□□ -0.9
Chd6A3KFM7 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Chd6A3KFM7 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gm8730-201ENSMUST00000076373 954 ntBASIC9.42□□□□□ -0.9
Chd6A3KFM7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd6A3KFM7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd6A3KFM7 Gm13002-201ENSMUST00000119286 682 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms