Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chmp2aQ9DB34 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Gm15515-201ENSMUST00000117827 822 ntBASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Gm12501-201ENSMUST00000119163 529 ntBASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Gm8343-201ENSMUST00000182705 994 ntBASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.26□□□□□ -0.45
Chmp2aQ9DB34 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gm12196-201ENSMUST00000120954 262 ntBASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2aQ9DB34 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms