Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm7722-201ENSMUST00000120646 741 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm15276-201ENSMUST00000145953 498 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm17376-201ENSMUST00000166016 84 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm19187-201ENSMUST00000206781 892 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm45598-202ENSMUST00000210719 986 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Gm19994-201ENSMUST00000217086 586 ntBASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms