Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Thumpd1Q99J36 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.46□□□□□ -0.73
Thumpd1Q99J36 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Gm25043-201ENSMUST00000158604 212 ntBASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.46□□□□□ -0.73
Thumpd1Q99J36 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Gm19287-201ENSMUST00000203190 358 ntBASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Thumpd1Q99J36 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Thumpd1Q99J36 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Gm2546-201ENSMUST00000182630 991 ntBASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.45□□□□□ -0.74
Thumpd1Q99J36 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Thumpd1Q99J36 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms