Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Tram1Q91V04 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Tram1Q91V04 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Tram1Q91V04 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Tram1Q91V04 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.1□□□□□ -0.79
Tram1Q91V04 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.1□□□□□ -0.79
Tram1Q91V04 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Rprl1-201ENSMUST00000158050 327 ntBASIC10.1□□□□□ -0.79
Tram1Q91V04 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.1□□□□□ -0.79
Tram1Q91V04 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.1□□□□□ -0.79
Tram1Q91V04 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Tram1Q91V04 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Tram1Q91V04 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Tram1Q91V04 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Gm5867-201ENSMUST00000063197 592 ntBASIC10.09□□□□□ -0.79
Tram1Q91V04 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.09□□□□□ -0.79
Tram1Q91V04 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Tram1Q91V04 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Tram1Q91V04 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms