Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm24934-201ENSMUST00000103764 111 ntBASIC11.38□□□□□ -0.59
Rnf8Q8VC56 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm14109-201ENSMUST00000118814 309 ntBASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.38□□□□□ -0.59
Rnf8Q8VC56 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rnf8Q8VC56 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm13665-201ENSMUST00000120830 528 ntBASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm24845-201ENSMUST00000158034 109 ntBASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.37□□□□□ -0.59
Rnf8Q8VC56 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf8Q8VC56 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf8Q8VC56 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Rnf8Q8VC56 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf8Q8VC56 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf8Q8VC56 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf8Q8VC56 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms