Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp54Q8BL06 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.43■□□□□ 0.22
Usp54Q8BL06 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Gm6158-201ENSMUST00000109467 904 ntBASIC16.43■□□□□ 0.22
Usp54Q8BL06 Gm11475-201ENSMUST00000118482 476 ntBASIC16.43■□□□□ 0.22
Usp54Q8BL06 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp54Q8BL06 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Gm37452-201ENSMUST00000194416 1160 ntBASIC16.43■□□□□ 0.22
Usp54Q8BL06 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Olfr692-202ENSMUST00000217827 1126 ntBASIC16.43■□□□□ 0.22
Usp54Q8BL06 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp54Q8BL06 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Usp54Q8BL06 n-R5s71-201ENSMUST00000093668 119 ntBASIC16.43■□□□□ 0.22
Usp54Q8BL06 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Usp54Q8BL06 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Gm5822-201ENSMUST00000161562 1378 ntBASIC16.42■□□□□ 0.22
Usp54Q8BL06 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.42■□□□□ 0.22
Usp54Q8BL06 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Gm22344-201ENSMUST00000122642 278 ntBASIC16.42■□□□□ 0.22
Usp54Q8BL06 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Usp54Q8BL06 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.41■□□□□ 0.22
Usp54Q8BL06 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Gm43167-201ENSMUST00000202001 1606 ntBASIC16.41■□□□□ 0.22
Usp54Q8BL06 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC16.41■□□□□ 0.22
Usp54Q8BL06 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Gm16165-201ENSMUST00000160140 795 ntBASIC16.41■□□□□ 0.22
Usp54Q8BL06 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Gm43854-201ENSMUST00000200418 394 ntBASIC16.41■□□□□ 0.22
Usp54Q8BL06 Gm44953-201ENSMUST00000208745 1286 ntBASIC16.41■□□□□ 0.22
Usp54Q8BL06 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp54Q8BL06 CT030166.5-201ENSMUST00000222249 420 ntBASIC16.41■□□□□ 0.22
Usp54Q8BL06 CT010480.2-201ENSMUST00000225424 737 ntBASIC16.41■□□□□ 0.22
Usp54Q8BL06 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC16.41■□□□□ 0.22
Usp54Q8BL06 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp54Q8BL06 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Gm6157-201ENSMUST00000199935 1897 ntBASIC16.4■□□□□ 0.22
Usp54Q8BL06 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Mir432-201ENSMUST00000157230 75 ntBASIC16.4■□□□□ 0.22
Usp54Q8BL06 Gm26368-201ENSMUST00000157826 118 ntBASIC16.4■□□□□ 0.22
Usp54Q8BL06 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Gm24954-201ENSMUST00000178831 110 ntBASIC16.4■□□□□ 0.22
Usp54Q8BL06 Gm37197-201ENSMUST00000195607 401 ntBASIC16.4■□□□□ 0.22
Usp54Q8BL06 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp54Q8BL06 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms