Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm9089-201ENSMUST00000122027 526 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm8531-201ENSMUST00000188319 893 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm37458-201ENSMUST00000194055 410 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm8574-201ENSMUST00000203207 924 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm45120-201ENSMUST00000208880 408 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nod1Q8BHB0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Map1b-203ENSMUST00000223725 2669 ntBASIC12.35□□□□□ -0.43
Nod1Q8BHB0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Gm5298-201ENSMUST00000201122 892 ntBASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Gm8342-201ENSMUST00000209839 757 ntBASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nod1Q8BHB0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 166.1 ms