Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 CT010431.1-201ENSMUST00000221249 1080 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm11246-201ENSMUST00000120880 345 ntBASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm15566-201ENSMUST00000121130 590 ntBASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm13263-201ENSMUST00000121271 838 ntBASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm16397-201ENSMUST00000122201 494 ntBASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm2517-201ENSMUST00000215651 348 ntBASIC10.98□□□□□ -0.65
Pif1Q80SX8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Snora73b-201ENSMUST00000083419 205 ntBASIC10.98□□□□□ -0.65
Pif1Q80SX8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.98□□□□□ -0.65
Pif1Q80SX8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pif1Q80SX8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Gm37893-201ENSMUST00000192826 2437 ntBASIC10.97□□□□□ -0.65
Pif1Q80SX8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pif1Q80SX8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pif1Q80SX8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms