Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sycp1Q62209 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sycp1Q62209 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.21□□□□□ -0.29
Sycp1Q62209 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.21□□□□□ -0.29
Sycp1Q62209 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm29615-201ENSMUST00000185371 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm28224-201ENSMUST00000186078 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm29001-201ENSMUST00000186177 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm28292-201ENSMUST00000186593 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm28101-201ENSMUST00000187608 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm29076-201ENSMUST00000187689 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm28302-201ENSMUST00000187931 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm28646-201ENSMUST00000188220 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm28205-201ENSMUST00000189177 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm29032-201ENSMUST00000189797 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm28695-201ENSMUST00000190300 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm37448-201ENSMUST00000192795 697 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm43962-201ENSMUST00000203898 190 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm4607-201ENSMUST00000206649 577 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.21□□□□□ -0.29
Sycp1Q62209 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.21□□□□□ -0.29
Sycp1Q62209 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm5455-201ENSMUST00000058710 715 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sycp1Q62209 Mir433-201ENSMUST00000093564 124 ntBASIC13.21□□□□□ -0.29
Sycp1Q62209 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sycp1Q62209 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sycp1Q62209 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
Sycp1Q62209 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sycp1Q62209 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.21□□□□□ -0.3
Sycp1Q62209 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sycp1Q62209 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Sycp1Q62209 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sycp1Q62209 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.21□□□□□ -0.3
Sycp1Q62209 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sycp1Q62209 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sycp1Q62209 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sycp1Q62209 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sycp1Q62209 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Gm5419-201ENSMUST00000119301 527 ntBASIC13.2□□□□□ -0.3
Sycp1Q62209 Gm15610-201ENSMUST00000120584 195 ntBASIC13.2□□□□□ -0.3
Sycp1Q62209 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Gm8385-201ENSMUST00000058999 643 ntBASIC13.2□□□□□ -0.3
Sycp1Q62209 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.2□□□□□ -0.3
Sycp1Q62209 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Sycp1Q62209 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.2□□□□□ -0.3
Sycp1Q62209 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sycp1Q62209 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Sycp1Q62209 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Sycp1Q62209 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sycp1Q62209 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sycp1Q62209 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sycp1Q62209 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sycp1Q62209 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sycp1Q62209 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Sycp1Q62209 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sycp1Q62209 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sycp1Q62209 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sycp1Q62209 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sycp1Q62209 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sycp1Q62209 Gm24749-201ENSMUST00000157838 343 ntBASIC13.19□□□□□ -0.3
Sycp1Q62209 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms