Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox17Q61473 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox17Q61473 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox17Q61473 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox17Q61473 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Sox17Q61473 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Gm11960-201ENSMUST00000122068 925 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Sox17Q61473 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Gm25261-201ENSMUST00000157416 134 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Sox17Q61473 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Gm29127-201ENSMUST00000188304 517 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.98□□□□□ -0.65
Sox17Q61473 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Sox17Q61473 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox17Q61473 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox17Q61473 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Sox17Q61473 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.98□□□□□ -0.65
Sox17Q61473 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.98□□□□□ -0.65
Sox17Q61473 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox17Q61473 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox17Q61473 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Rgr-203ENSMUST00000225070 4704 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Sox17Q61473 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox17Q61473 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.97□□□□□ -0.65
Sox17Q61473 Gm15806-201ENSMUST00000120696 955 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Gm24845-201ENSMUST00000158034 109 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.97□□□□□ -0.65
Sox17Q61473 Gm9002-201ENSMUST00000178437 499 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox17Q61473 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Gm42627-201ENSMUST00000197347 224 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Sox17Q61473 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.97□□□□□ -0.65
Sox17Q61473 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox17Q61473 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox17Q61473 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox17Q61473 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms