Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Gm5455-201ENSMUST00000058710 715 ntBASIC14.43□□□□□ -0.1
Nkx1-2P42580 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-2P42580 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Gm18806-201ENSMUST00000207607 1775 ntBASIC14.42□□□□□ -0.1
Nkx1-2P42580 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.42□□□□□ -0.1
Nkx1-2P42580 Lect2-202ENSMUST00000225183 823 ntBASIC14.42□□□□□ -0.1
Nkx1-2P42580 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Gm10829-201ENSMUST00000202084 2988 ntBASIC14.42□□□□□ -0.1
Nkx1-2P42580 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx1-2P42580 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm29358-202ENSMUST00000187941 3227 ntBASIC14.41□□□□□ -0.1
Nkx1-2P42580 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm38314-201ENSMUST00000195709 625 ntBASIC14.41□□□□□ -0.1
Nkx1-2P42580 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm45598-202ENSMUST00000210719 986 ntBASIC14.41□□□□□ -0.1
Nkx1-2P42580 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.41□□□□□ -0.1
Nkx1-2P42580 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm44369-201ENSMUST00000204543 2175 ntBASIC14.41□□□□□ -0.1
Nkx1-2P42580 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 AC154171.2-201ENSMUST00000225219 2652 ntBASIC14.41□□□□□ -0.1
Nkx1-2P42580 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx1-2P42580 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx1-2P42580 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx1-2P42580 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx1-2P42580 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.4□□□□□ -0.1
Nkx1-2P42580 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx1-2P42580 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx1-2P42580 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms