Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sox6P40645 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sox6P40645 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.05□□□□□ -0.64
Sox6P40645 Gm23119-201ENSMUST00000158610 140 ntBASIC11.05□□□□□ -0.64
Sox6P40645 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.05□□□□□ -0.64
Sox6P40645 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.05□□□□□ -0.64
Sox6P40645 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.05□□□□□ -0.64
Sox6P40645 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.05□□□□□ -0.64
Sox6P40645 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.05□□□□□ -0.64
Sox6P40645 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox6P40645 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.05□□□□□ -0.64
Sox6P40645 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox6P40645 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Sox6P40645 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Gm24934-201ENSMUST00000103764 111 ntBASIC11.04□□□□□ -0.64
Sox6P40645 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.04□□□□□ -0.64
Sox6P40645 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Gm3096-201ENSMUST00000185770 364 ntBASIC11.04□□□□□ -0.64
Sox6P40645 Gm43758-201ENSMUST00000199500 367 ntBASIC11.04□□□□□ -0.64
Sox6P40645 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Gm7783-201ENSMUST00000204795 781 ntBASIC11.04□□□□□ -0.64
Sox6P40645 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms