Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.38□□□□□ -0.59
TfamP40630 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.37□□□□□ -0.59
TfamP40630 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
TfamP40630 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
TfamP40630 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.37□□□□□ -0.59
TfamP40630 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
TfamP40630 Gm11511-201ENSMUST00000118146 540 ntBASIC11.37□□□□□ -0.59
TfamP40630 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Gm9192-201ENSMUST00000183221 985 ntBASIC11.37□□□□□ -0.59
TfamP40630 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
TfamP40630 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.37□□□□□ -0.59
TfamP40630 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.37□□□□□ -0.59
TfamP40630 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.37□□□□□ -0.59
TfamP40630 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.37□□□□□ -0.59
TfamP40630 Gm45598-202ENSMUST00000210719 986 ntBASIC11.37□□□□□ -0.59
TfamP40630 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.37□□□□□ -0.59
TfamP40630 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.37□□□□□ -0.59
TfamP40630 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TfamP40630 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TfamP40630 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TfamP40630 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TfamP40630 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.36□□□□□ -0.59
TfamP40630 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.36□□□□□ -0.59
TfamP40630 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
TfamP40630 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TfamP40630 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
TfamP40630 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
TfamP40630 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.36□□□□□ -0.59
TfamP40630 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.36□□□□□ -0.59
TfamP40630 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.36□□□□□ -0.59
TfamP40630 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.36□□□□□ -0.59
TfamP40630 Gm8885-201ENSMUST00000189382 598 ntBASIC11.36□□□□□ -0.59
TfamP40630 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TfamP40630 Gm19287-201ENSMUST00000203190 358 ntBASIC11.36□□□□□ -0.59
TfamP40630 Gm8956-201ENSMUST00000203939 825 ntBASIC11.36□□□□□ -0.59
TfamP40630 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.36□□□□□ -0.59
TfamP40630 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.36□□□□□ -0.59
TfamP40630 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.36□□□□□ -0.59
TfamP40630 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Gm5455-201ENSMUST00000058710 715 ntBASIC11.36□□□□□ -0.59
TfamP40630 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
TfamP40630 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TfamP40630 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 316.5 ms