Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Slc6a1P31648 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Slc6a1P31648 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.12□□□□□ -0.79
Slc6a1P31648 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.12□□□□□ -0.79
Slc6a1P31648 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.12□□□□□ -0.79
Slc6a1P31648 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Gm6007-201ENSMUST00000208170 823 ntBASIC10.12□□□□□ -0.79
Slc6a1P31648 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.12□□□□□ -0.79
Slc6a1P31648 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.12□□□□□ -0.79
Slc6a1P31648 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.12□□□□□ -0.79
Slc6a1P31648 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Slc6a1P31648 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Slc6a1P31648 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Slc6a1P31648 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Snora73a-201ENSMUST00000082453 205 ntBASIC10.11□□□□□ -0.79
Slc6a1P31648 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.11□□□□□ -0.79
Slc6a1P31648 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Slc6a1P31648 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.11□□□□□ -0.79
Slc6a1P31648 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms