Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RxrbP28704 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.81□□□□□ -0.52
RxrbP28704 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.81□□□□□ -0.52
RxrbP28704 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RxrbP28704 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.81□□□□□ -0.52
RxrbP28704 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RxrbP28704 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RxrbP28704 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RxrbP28704 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.8□□□□□ -0.52
RxrbP28704 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.8□□□□□ -0.52
RxrbP28704 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.8□□□□□ -0.52
RxrbP28704 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.8□□□□□ -0.52
RxrbP28704 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Gm12164-201ENSMUST00000121695 551 ntBASIC11.8□□□□□ -0.52
RxrbP28704 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.8□□□□□ -0.52
RxrbP28704 Gm27514-201ENSMUST00000183692 110 ntBASIC11.8□□□□□ -0.52
RxrbP28704 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RxrbP28704 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.8□□□□□ -0.52
RxrbP28704 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RxrbP28704 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RxrbP28704 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RxrbP28704 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RxrbP28704 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.79□□□□□ -0.52
RxrbP28704 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Snora78-201ENSMUST00000158630 128 ntBASIC11.79□□□□□ -0.52
RxrbP28704 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.79□□□□□ -0.52
RxrbP28704 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.79□□□□□ -0.52
RxrbP28704 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Gm19994-201ENSMUST00000217086 586 ntBASIC11.79□□□□□ -0.52
RxrbP28704 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.79□□□□□ -0.52
RxrbP28704 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.79□□□□□ -0.52
RxrbP28704 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RxrbP28704 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RxrbP28704 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RxrbP28704 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.79□□□□□ -0.52
RxrbP28704 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms