Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.62□□□□□ -0.23
Col1a1P11087 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.62□□□□□ -0.23
Col1a1P11087 Gm24328-201ENSMUST00000175104 67 ntBASIC13.62□□□□□ -0.23
Col1a1P11087 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Gm37782-201ENSMUST00000194879 678 ntBASIC13.62□□□□□ -0.23
Col1a1P11087 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC13.62□□□□□ -0.23
Col1a1P11087 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.62□□□□□ -0.23
Col1a1P11087 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.62□□□□□ -0.23
Col1a1P11087 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col1a1P11087 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.62□□□□□ -0.23
Col1a1P11087 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col1a1P11087 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.62□□□□□ -0.23
Col1a1P11087 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Col1a1P11087 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.62□□□□□ -0.23
Col1a1P11087 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col1a1P11087 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col1a1P11087 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.62□□□□□ -0.23
Col1a1P11087 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col1a1P11087 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col1a1P11087 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Col1a1P11087 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col1a1P11087 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm8111-201ENSMUST00000117659 987 ntBASIC13.61□□□□□ -0.23
Col1a1P11087 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Col1a1P11087 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm27956-201ENSMUST00000175604 260 ntBASIC13.61□□□□□ -0.23
Col1a1P11087 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col1a1P11087 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col1a1P11087 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col1a1P11087 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm30946-201ENSMUST00000198288 724 ntBASIC13.61□□□□□ -0.23
Col1a1P11087 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm8255-201ENSMUST00000218693 305 ntBASIC13.61□□□□□ -0.23
Col1a1P11087 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.61□□□□□ -0.23
Col1a1P11087 Capsl-202ENSMUST00000226688 739 ntBASIC13.61□□□□□ -0.23
Col1a1P11087 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.61□□□□□ -0.23
Col1a1P11087 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Col1a1P11087 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col1a1P11087 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.61□□□□□ -0.23
Col1a1P11087 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Col1a1P11087 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.61□□□□□ -0.23
Col1a1P11087 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm4903-201ENSMUST00000210462 405 ntBASIC13.61□□□□□ -0.23
Col1a1P11087 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col1a1P11087 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col1a1P11087 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col1a1P11087 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col1a1P11087 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col1a1P11087 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms