Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
P04214 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04214 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P04214 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04214 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P04214 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.23□□□□□ -0.45
P04214 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.23□□□□□ -0.45
P04214 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.23□□□□□ -0.45
P04214 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Gm6158-201ENSMUST00000109467 904 ntBASIC12.23□□□□□ -0.45
P04214 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Gm14165-201ENSMUST00000121456 952 ntBASIC12.23□□□□□ -0.45
P04214 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.23□□□□□ -0.45
P04214 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
P04214 Gm24992-201ENSMUST00000157412 130 ntBASIC12.23□□□□□ -0.45
P04214 Gm24328-201ENSMUST00000175104 67 ntBASIC12.23□□□□□ -0.45
P04214 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.23□□□□□ -0.45
P04214 Gm9487-201ENSMUST00000216600 472 ntBASIC12.23□□□□□ -0.45
P04214 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.23□□□□□ -0.45
P04214 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.23□□□□□ -0.45
P04214 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.23□□□□□ -0.45
P04214 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
P04214 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.23□□□□□ -0.45
P04214 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04214 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.23□□□□□ -0.45
P04214 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P04214 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04214 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04214 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.22□□□□□ -0.45
P04214 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.22□□□□□ -0.45
P04214 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.22□□□□□ -0.45
P04214 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.22□□□□□ -0.45
P04214 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
P04214 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.22□□□□□ -0.45
P04214 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.22□□□□□ -0.45
P04214 Gm14071-201ENSMUST00000117817 509 ntBASIC12.22□□□□□ -0.45
P04214 Gm8302-201ENSMUST00000119217 852 ntBASIC12.22□□□□□ -0.45
P04214 Gm15196-201ENSMUST00000121406 482 ntBASIC12.22□□□□□ -0.45
P04214 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.22□□□□□ -0.45
P04214 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.22□□□□□ -0.45
P04214 Gm12906-201ENSMUST00000154610 441 ntBASIC12.22□□□□□ -0.45
P04214 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.22□□□□□ -0.45
P04214 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Gm9162-201ENSMUST00000182081 991 ntBASIC12.22□□□□□ -0.45
P04214 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.22□□□□□ -0.45
P04214 Gm29067-201ENSMUST00000190821 470 ntBASIC12.22□□□□□ -0.45
P04214 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Gm14005-208ENSMUST00000223654 681 ntBASIC12.22□□□□□ -0.45
P04214 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
P04214 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.22□□□□□ -0.45
P04214 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P04214 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P04214 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms