Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.35□□□□□ -0.75
NgfP01139 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
NgfP01139 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.35□□□□□ -0.75
NgfP01139 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.35□□□□□ -0.75
NgfP01139 Gm13117-201ENSMUST00000120894 691 ntBASIC10.35□□□□□ -0.75
NgfP01139 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
NgfP01139 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.35□□□□□ -0.75
NgfP01139 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.35□□□□□ -0.75
NgfP01139 Gm25492-201ENSMUST00000157383 129 ntBASIC10.35□□□□□ -0.75
NgfP01139 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.35□□□□□ -0.75
NgfP01139 Gm20495-201ENSMUST00000173902 235 ntBASIC10.35□□□□□ -0.75
NgfP01139 Gm22877-201ENSMUST00000175451 105 ntBASIC10.35□□□□□ -0.75
NgfP01139 Gm6407-201ENSMUST00000176468 549 ntBASIC10.35□□□□□ -0.75
NgfP01139 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.35□□□□□ -0.75
NgfP01139 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.35□□□□□ -0.75
NgfP01139 Gm3726-201ENSMUST00000203110 785 ntBASIC10.35□□□□□ -0.75
NgfP01139 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Gm18561-201ENSMUST00000206027 804 ntBASIC10.35□□□□□ -0.75
NgfP01139 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.35□□□□□ -0.75
NgfP01139 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.35□□□□□ -0.75
NgfP01139 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
NgfP01139 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NgfP01139 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.34□□□□□ -0.75
NgfP01139 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.34□□□□□ -0.75
NgfP01139 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
NgfP01139 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
NgfP01139 Gm11700-201ENSMUST00000119409 403 ntBASIC10.34□□□□□ -0.75
NgfP01139 Gm12030-201ENSMUST00000121917 223 ntBASIC10.34□□□□□ -0.75
NgfP01139 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
NgfP01139 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Gm43163-201ENSMUST00000196571 442 ntBASIC10.34□□□□□ -0.75
NgfP01139 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Gm5805-201ENSMUST00000072779 456 ntBASIC10.34□□□□□ -0.75
NgfP01139 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
NgfP01139 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
NgfP01139 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NgfP01139 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.33□□□□□ -0.76
NgfP01139 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NgfP01139 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NgfP01139 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NgfP01139 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
NgfP01139 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NgfP01139 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.33□□□□□ -0.76
NgfP01139 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NgfP01139 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
NgfP01139 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NgfP01139 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.33□□□□□ -0.76
NgfP01139 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NgfP01139 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
NgfP01139 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
NgfP01139 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms