Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Gm18859-201ENSMUST00000118792 825 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Gm22662-201ENSMUST00000175290 256 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Gm7456-201ENSMUST00000182862 1011 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Gm5254-201ENSMUST00000188353 977 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Gm4903-201ENSMUST00000210462 405 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 CU025215.1-201ENSMUST00000222986 603 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm24140-201ENSMUST00000122773 326 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm7928-201ENSMUST00000181249 701 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm7504-201ENSMUST00000201449 424 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm43364-201ENSMUST00000196046 3274 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Mir7011-201ENSMUST00000183768 73 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm38063-201ENSMUST00000193990 342 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Gm44908-201ENSMUST00000208610 266 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 AC241616.1-201ENSMUST00000213741 166 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 AC132384.2-201ENSMUST00000218018 526 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 AC163638.2-201ENSMUST00000224920 827 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 AC158986.2-201ENSMUST00000227487 618 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Chd6A3KFM7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC9.45□□□□□ -0.9
Chd6A3KFM7 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.45□□□□□ -0.9
Chd6A3KFM7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm14176-201ENSMUST00000121302 477 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm23899-201ENSMUST00000158112 90 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm5529-201ENSMUST00000165691 891 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.44□□□□□ -0.9
Chd6A3KFM7 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms