Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Smim17A0A504 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm11618-201ENSMUST00000117946 267 ntBASIC10.6□□□□□ -0.71
Smim17A0A504 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm6152-201ENSMUST00000151704 340 ntBASIC10.6□□□□□ -0.71
Smim17A0A504 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm42693-201ENSMUST00000196779 631 ntBASIC10.6□□□□□ -0.71
Smim17A0A504 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.6□□□□□ -0.71
Smim17A0A504 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.6□□□□□ -0.71
Smim17A0A504 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.6□□□□□ -0.71
Smim17A0A504 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Smim17A0A504 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm5867-201ENSMUST00000063197 592 ntBASIC10.6□□□□□ -0.71
Smim17A0A504 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.6□□□□□ -0.71
Smim17A0A504 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.6□□□□□ -0.71
Smim17A0A504 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Smim17A0A504 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.6□□□□□ -0.71
Smim17A0A504 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.59□□□□□ -0.71
Smim17A0A504 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smim17A0A504 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.59□□□□□ -0.71
Smim17A0A504 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Smim17A0A504 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.59□□□□□ -0.71
Smim17A0A504 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.59□□□□□ -0.71
Smim17A0A504 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smim17A0A504 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.59□□□□□ -0.71
Smim17A0A504 Gm15920-201ENSMUST00000118998 402 ntBASIC10.59□□□□□ -0.71
Smim17A0A504 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smim17A0A504 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.59□□□□□ -0.71
Smim17A0A504 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.59□□□□□ -0.71
Smim17A0A504 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Smim17A0A504 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.59□□□□□ -0.71
Smim17A0A504 Gm38092-201ENSMUST00000195600 653 ntBASIC10.59□□□□□ -0.71
Smim17A0A504 Gm6439-201ENSMUST00000199849 862 ntBASIC10.59□□□□□ -0.71
Smim17A0A504 Gm44958-201ENSMUST00000203734 736 ntBASIC10.59□□□□□ -0.71
Smim17A0A504 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Smim17A0A504 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.59□□□□□ -0.71
Smim17A0A504 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.59□□□□□ -0.71
Smim17A0A504 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.59□□□□□ -0.71
Smim17A0A504 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.59□□□□□ -0.71
Smim17A0A504 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Smim17A0A504 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smim17A0A504 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smim17A0A504 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms