Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Gm5982-201ENSMUST00000196234 512 ntBASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm5538W4VSP6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Gm12217-201ENSMUST00000118858 696 ntBASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Gm45575-201ENSMUST00000210283 548 ntBASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Gm5369-201ENSMUST00000217499 588 ntBASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Gm7940-201ENSMUST00000218195 769 ntBASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Gm6867-201ENSMUST00000219165 425 ntBASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm5538W4VSP6 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm11663-201ENSMUST00000117888 290 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm15207-201ENSMUST00000119259 442 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm25732-201ENSMUST00000175168 60 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm16505-201ENSMUST00000179981 232 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm29199-201ENSMUST00000187766 775 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.96□□□□□ -0.49
Gm5538W4VSP6 AU022133-201ENSMUST00000200601 873 ntBASIC11.96□□□□□ -0.49
Gm5538W4VSP6 Gm2553-201ENSMUST00000215986 605 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms