Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Gm3329-201ENSMUST00000159873 556 ntBASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cacna1fQ9JIS7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gm7719-201ENSMUST00000182374 975 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gm43163-201ENSMUST00000196571 442 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gm9487-201ENSMUST00000216600 472 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Id2-203ENSMUST00000222667 958 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gm7536-201ENSMUST00000077389 444 ntBASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cacna1fQ9JIS7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Gm22594-201ENSMUST00000104251 130 ntBASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Gm11560-201ENSMUST00000117567 948 ntBASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Gm13039-201ENSMUST00000118638 794 ntBASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Gm5700-201ENSMUST00000191483 989 ntBASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cacna1fQ9JIS7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms