Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Trim54Q9ERP3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim54Q9ERP3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.77□□□□□ -0.36
Trim54Q9ERP3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim54Q9ERP3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim54Q9ERP3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm24844-201ENSMUST00000158679 127 ntBASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm8194-201ENSMUST00000159783 859 ntBASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm34023-201ENSMUST00000195539 217 ntBASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim54Q9ERP3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm1848-201ENSMUST00000120711 789 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm43520-201ENSMUST00000197996 164 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm6450-201ENSMUST00000200896 574 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.76□□□□□ -0.37
Trim54Q9ERP3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim54Q9ERP3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm11783-201ENSMUST00000119549 885 ntBASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm22138-201ENSMUST00000158748 128 ntBASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm3150-201ENSMUST00000166418 204 ntBASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm38151-201ENSMUST00000195085 289 ntBASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm44329-201ENSMUST00000197469 112 ntBASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm44124-201ENSMUST00000204159 472 ntBASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm44506-201ENSMUST00000206278 965 ntBASIC12.75□□□□□ -0.37
Trim54Q9ERP3 Gm45113-201ENSMUST00000207518 165 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms