Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldnd1Q9CQX5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Mir1905-201ENSMUST00000122779 82 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm26368-201ENSMUST00000157826 118 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm23400-201ENSMUST00000174994 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm26463-201ENSMUST00000175065 101 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm24332-201ENSMUST00000175102 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm25959-201ENSMUST00000175112 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm22475-201ENSMUST00000175169 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm22903-201ENSMUST00000175193 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm25070-201ENSMUST00000175237 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm24159-201ENSMUST00000175264 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm25299-201ENSMUST00000175283 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm23798-201ENSMUST00000175560 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm23802-201ENSMUST00000175565 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm25708-201ENSMUST00000177687 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm24370-201ENSMUST00000178007 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm23049-201ENSMUST00000178068 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm28019-201ENSMUST00000178138 101 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm25571-201ENSMUST00000178322 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm25355-201ENSMUST00000178456 101 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm24975-201ENSMUST00000178492 101 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm23189-201ENSMUST00000178954 102 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm25100-201ENSMUST00000179750 101 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm23064-201ENSMUST00000179866 101 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm5982-201ENSMUST00000196234 512 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.03□□□□□ -0.48
Cldnd1Q9CQX5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cldnd1Q9CQX5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldnd1Q9CQX5 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldnd1Q9CQX5 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldnd1Q9CQX5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cldnd1Q9CQX5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldnd1Q9CQX5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldnd1Q9CQX5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Gm24809-201ENSMUST00000175318 271 ntBASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms