Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.45□□□□□ -0.58
SynpoQ8CC35 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 AY036118-201ENSMUST00000200021 923 ntBASIC11.45□□□□□ -0.58
SynpoQ8CC35 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.45□□□□□ -0.58
SynpoQ8CC35 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.45□□□□□ -0.58
SynpoQ8CC35 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SynpoQ8CC35 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Gm11331-201ENSMUST00000119764 288 ntBASIC11.44□□□□□ -0.58
SynpoQ8CC35 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Gm28071-201ENSMUST00000190355 478 ntBASIC11.44□□□□□ -0.58
SynpoQ8CC35 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Gm35960-201ENSMUST00000202712 767 ntBASIC11.44□□□□□ -0.58
SynpoQ8CC35 Gm44882-201ENSMUST00000205702 802 ntBASIC11.44□□□□□ -0.58
SynpoQ8CC35 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.44□□□□□ -0.58
SynpoQ8CC35 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.44□□□□□ -0.58
SynpoQ8CC35 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SynpoQ8CC35 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm11989-201ENSMUST00000117240 672 ntBASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm11362-201ENSMUST00000118838 850 ntBASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm27552-201ENSMUST00000183351 62 ntBASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm27844-201ENSMUST00000183613 62 ntBASIC11.43□□□□□ -0.58
SynpoQ8CC35 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm7003-201ENSMUST00000195089 312 ntBASIC11.43□□□□□ -0.58
SynpoQ8CC35 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.43□□□□□ -0.58
SynpoQ8CC35 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms