Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Gm14017-201ENSMUST00000121934 386 ntBASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.95□□□□□ -0.34
Trim9Q8C7M3 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm14724-201ENSMUST00000118400 537 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm12196-201ENSMUST00000120954 262 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm2260-201ENSMUST00000184965 657 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm5714-201ENSMUST00000197343 566 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm45113-201ENSMUST00000207518 165 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm18730-201ENSMUST00000218038 343 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gm10254-201ENSMUST00000052888 867 ntBASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim9Q8C7M3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms