Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.16□□□□□ -0.62
Nkx2-6P43688 Gm44506-201ENSMUST00000206278 965 ntBASIC11.16□□□□□ -0.62
Nkx2-6P43688 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-6P43688 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.16□□□□□ -0.62
Nkx2-6P43688 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.16□□□□□ -0.62
Nkx2-6P43688 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-6P43688 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm23771-201ENSMUST00000178702 110 ntBASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm43058-201ENSMUST00000197645 625 ntBASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm44980-201ENSMUST00000205826 314 ntBASIC11.15□□□□□ -0.62
Nkx2-6P43688 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm17931-201ENSMUST00000208132 634 ntBASIC11.15□□□□□ -0.62
Nkx2-6P43688 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.15□□□□□ -0.62
Nkx2-6P43688 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.15□□□□□ -0.62
Nkx2-6P43688 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.15□□□□□ -0.62
Nkx2-6P43688 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-6P43688 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Nkx2-6P43688 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-6P43688 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-6P43688 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.15□□□□□ -0.63
Nkx2-6P43688 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-6P43688 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-6P43688 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gm11949-201ENSMUST00000117640 372 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gm11451-201ENSMUST00000118946 630 ntBASIC11.14□□□□□ -0.63
Nkx2-6P43688 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-6P43688 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-6P43688 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms