Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sox6P40645 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.07□□□□□ -0.64
Sox6P40645 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sox6P40645 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.07□□□□□ -0.64
Sox6P40645 Gm14726-201ENSMUST00000120623 896 ntBASIC11.07□□□□□ -0.64
Sox6P40645 Gm14381-201ENSMUST00000122105 414 ntBASIC11.07□□□□□ -0.64
Sox6P40645 Gm15547-201ENSMUST00000122152 333 ntBASIC11.07□□□□□ -0.64
Sox6P40645 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox6P40645 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Sox6P40645 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.07□□□□□ -0.64
Sox6P40645 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox6P40645 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.07□□□□□ -0.64
Sox6P40645 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Sox6P40645 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.07□□□□□ -0.64
Sox6P40645 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.07□□□□□ -0.64
Sox6P40645 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox6P40645 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox6P40645 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Gm25214-201ENSMUST00000104573 129 ntBASIC11.06□□□□□ -0.64
Sox6P40645 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox6P40645 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
Sox6P40645 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.06□□□□□ -0.64
Sox6P40645 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Gm38341-201ENSMUST00000195357 515 ntBASIC11.06□□□□□ -0.64
Sox6P40645 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.06□□□□□ -0.64
Sox6P40645 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox6P40645 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.06□□□□□ -0.64
Sox6P40645 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.06□□□□□ -0.64
Sox6P40645 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox6P40645 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms